Articles producció científica> Bioquímica i Biotecnologia

ATG18 and FAB1 are involved in dehydration stress tolerance in saccharomyces cerevisiae

  • Dades identificatives

    Identificador: PC:1165
    Autors:
    López-Martínez, G.Margalef-Català, M.Salinas, F.Liti, G.Cordero-Otero, R.
    Resum:
    Recently, different dehydration-based technologies have been evaluated for the purpose of cell and tissue preservation. Although some early results have been promising, they have not satisfied the requirements for large-scale applications. The long experience of using quantitative trait loci (QTLs) with the yeast Saccharomyces cerevisiae has proven to be a good model organism for studying the link between complex phenotypes and DNA variations. Here, we use QTL analysis as a tool for identifying the specific yeast traits involved in dehydration stress tolerance. Three hybrids obtained from stable haploids and sequenced in the Saccharomyces Genome Resequencing Project showed intermediate dehydration tolerance in most cases. The dehydration resistance trait of 96 segregants from each hybrid was quantified. A smooth, continuous distribution of the anhydrobiosis tolerance trait was found, suggesting that this trait is determined by multiple QTLs. Therefore, we carried out a QTL analysis to identify the determinants of this dehydration tolerance trait at the genomic level. Among the genes identified after reciprocal hemizygosity assays, RSM22, ATG18 and DBR1 had not been referenced in previous studies. We report new phenotypes for these genes using a previously validated test. Finally, our data illustrates the power of this approach in the investigation of the complex cell dehydration phenotype. © 2015 López-Martínez et al.
  • Altres:

    Autor segons l'article: López-Martínez, G. Margalef-Català, M. Salinas, F. Liti, G. Cordero-Otero, R.
    Departament: Bioquímica i Biotecnologia
    Autor/s de la URV: LÓPEZ MARTÍNEZ, GEMA ISABEL MARGALEF CATALÀ, MARIA DEL MAR Salinas, F. Liti, G. CORDERO OTERO, RICARDO ROMÁN
    Paraules clau: anhydrobiosis article ATG18 gene
    Resum: Recently, different dehydration-based technologies have been evaluated for the purpose of cell and tissue preservation. Although some early results have been promising, they have not satisfied the requirements for large-scale applications. The long experience of using quantitative trait loci (QTLs) with the yeast Saccharomyces cerevisiae has proven to be a good model organism for studying the link between complex phenotypes and DNA variations. Here, we use QTL analysis as a tool for identifying the specific yeast traits involved in dehydration stress tolerance. Three hybrids obtained from stable haploids and sequenced in the Saccharomyces Genome Resequencing Project showed intermediate dehydration tolerance in most cases. The dehydration resistance trait of 96 segregants from each hybrid was quantified. A smooth, continuous distribution of the anhydrobiosis tolerance trait was found, suggesting that this trait is determined by multiple QTLs. Therefore, we carried out a QTL analysis to identify the determinants of this dehydration tolerance trait at the genomic level. Among the genes identified after reciprocal hemizygosity assays, RSM22, ATG18 and DBR1 had not been referenced in previous studies. We report new phenotypes for these genes using a previously validated test. Finally, our data illustrates the power of this approach in the investigation of the complex cell dehydration phenotype. © 2015 López-Martínez et al.
    Grup de recerca: Biotecnologia Microbiana dels Aliments Biotecnologia Enològica
    Àrees temàtiques: Bioquímica i biotecnologia Bioquímica y tecnología Biochemistry and technology
    Accès a la llicència d'ús: https://creativecommons.org/licenses/by/3.0/es/
    ISSN: 1932-6203
    Identificador de l'autor: n/a n/a n/a 0000-0002-2318-0775 0000-0001-5402-1278
    Data d'alta del registre: 2015-04-27
    Volum de revista: 10
    Versió de l'article dipositat: info:eu-repo/semantics/publishedVersion
    URL Document de llicència: https://repositori.urv.cat/ca/proteccio-de-dades/
    Entitat: Universitat Rovira i Virgili
    Any de publicació de la revista: 2015
    Pàgina inicial: 119606
    Tipus de publicació: Article Artículo Article
  • Paraules clau:

    Saccharomyces cerevisiae
    Llevats (Botànica) -- Biotecnologia
    anhydrobiosis
    article
    ATG18 gene
    Bioquímica i biotecnologia
    Bioquímica y tecnología
    Biochemistry and technology
    1932-6203
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