Autor segons l'article: Cañueto D, Gómez J, Salek RM, Correig X, Cañellas N.
Departament: Enginyeria Electrònica, Elèctrica i Automàtica
Autor/s de la URV: Cañellas Alberich, Nicolau / Correig Blanchar, Francesc Xavier
Paraules clau: Reproducibility R software package Profiling Open-source software Nmr Metabolite identification Metabolite Automatic profiling open-source software nmr metabolite identification automatic profiling
Resum: Introduction Adoption of automatic profiling tools for 1H-NMR-based metabolomic studies still lags behind other approaches in the absence of the flexibility and interactivity necessary to adapt to the properties of study data sets of complex matrices. Objectives To provide an open source tool that fully integrates these needs and enables the reproducibility of the profiling process. Methods rDolphin incorporates novel techniques to optimize exploratory analysis, metabolite identification, and validation of profiling output quality. Results The information and quality achieved in two public datasets of complex matrices are maximized. Conclusion rDolphin is an open-source R package (http://github.com/danielcanueto/rDolphin) able to provide the best balance between accuracy, reproducibility and ease of use.
Àrees temàtiques: Química Odontología Engenharias iv Endocrinology, diabetes and metabolism Endocrinology & metabolism Educação física Clinical biochemistry Ciências biológicas ii Ciências agrárias i Biotecnología Biochemistry
Accès a la llicència d'ús: https://creativecommons.org/licenses/by/3.0/es/
ISSN: 15733882
Adreça de correu electrònic de l'autor: xavier.correig@urv.cat nicolau.canyellas@urv.cat
Identificador de l'autor: 0000-0002-6902-3054 0000-0003-4856-8132
Data d'alta del registre: 2024-09-07
Versió de l'article dipositat: info:eu-repo/semantics/submittedVersion
Enllaç font original: https://link.springer.com/article/10.1007/s11306-018-1319-y
URL Document de llicència: https://repositori.urv.cat/ca/proteccio-de-dades/
Referència a l'article segons font original: Metabolomics. 14 (3): 24/1-24/5
Referència de l'ítem segons les normes APA: Cañueto D, Gómez J, Salek RM, Correig X, Cañellas N. (2018). rDolphin: a GUI R package for proficient automatic profiling of 1D 1H-NMR spectra of study datasets. Metabolomics, 14(3), 24/1-24/5. DOI: 10.1007/s11306-018-1319-y
DOI de l'article: 10.1007/s11306-018-1319-y
Entitat: Universitat Rovira i Virgili
Any de publicació de la revista: 2018
Tipus de publicació: Journal Publications
Repositori URV