Articles producció científica> Bioquímica i Biotecnologia

Microbiome dynamics during spontaneous fermentations of sound grapes in comparison with sour rot and Botrytis infected grapes

  • Dades identificatives

    Identificador: imarina:5878361
    Autors:
    Lleixa, JessicaKioroglou, DimitriosMas, Albertdel Carmen Portillo, Maria
    Resum:
    The main losses in viticulture around the world are normally associated with rotten grapes affecting both the chemical composition and the grape microbiota that later might affect the alcoholic fermentation. We analyzed the population in musts obtained from sour rotten, botrytized and healthy Macabeo grapes and the population dynamics during the spontaneous alcoholic fermentation by culture dependent and various culture independent methods including, for the first time, qPCR and massive sequencing. Grape health state affected the fermentation kinetics and also the microbial diversity and composition. Unexpectedly, the fermentation proceeded the fastest in the rotten must followed by the healthy and the botrytized grapes. As in previous studies, plate cell counts and qPCR results confirmed the increase in the number of both bacteria and fungi in the musts from damaged grapes. Massive sequencing detected higher biodiversity than the other techniques at each stage, with Saccharomyces and Oenococcus found already in the grape must. Hanseniaspora osmophila replaced to Hanseniaspora uvarum as the predominant yeast during the mid-fermentation stage for both damaged grapes. Furthermore, musts and beginning of fermentation from rotten and botrytized grapes consistently had a higher presence of the fungi Zygosaccharomyces, Penicillium and Aspergillus while high abundance of Botrytis were observed just for botrytized grapes. As expected, the acetic acid bacteria number increased in musts from rotten and botrytized grapes, mostly due to changes in proportion of the genus Gluconoacetobacter which remained more abundant during damaged grapes fermentation than during healthy ones. Interestingly, the presence of Oenococcus oeni at the end of the alcoholic fermentation was strongly affe
  • Altres:

    Autor segons l'article: Lleixa, Jessica; Kioroglou, Dimitrios; Mas, Albert; del Carmen Portillo, Maria
    Departament: Bioquímica i Biotecnologia
    Autor/s de la URV: Kioroglou, Dimitrios / LLEIXA DAGA, JESSICA / Mas Baron, Alberto / Portillo Guisado, Maria del Carmen
    Paraules clau: Yeasts Wine fermentation Wine Vitis Time quantitative pcr Sour rot Red wine Population-dynamics Non-saccharomyces yeasts Microbiota Massive sequencing Lactic acid bacteria Gradient gel-electrophoresis Food microbiology Fermentation Enumeration Botrytis Biodiversity Alcoholic fermentation Acetic-acid bacteria Acetic acid bacteria 16s ribosomal-rna sour rot massive sequencing lactic acid bacteria botrytis acetic acid bacteria
    Resum: The main losses in viticulture around the world are normally associated with rotten grapes affecting both the chemical composition and the grape microbiota that later might affect the alcoholic fermentation. We analyzed the population in musts obtained from sour rotten, botrytized and healthy Macabeo grapes and the population dynamics during the spontaneous alcoholic fermentation by culture dependent and various culture independent methods including, for the first time, qPCR and massive sequencing. Grape health state affected the fermentation kinetics and also the microbial diversity and composition. Unexpectedly, the fermentation proceeded the fastest in the rotten must followed by the healthy and the botrytized grapes. As in previous studies, plate cell counts and qPCR results confirmed the increase in the number of both bacteria and fungi in the musts from damaged grapes. Massive sequencing detected higher biodiversity than the other techniques at each stage, with Saccharomyces and Oenococcus found already in the grape must. Hanseniaspora osmophila replaced to Hanseniaspora uvarum as the predominant yeast during the mid-fermentation stage for both damaged grapes. Furthermore, musts and beginning of fermentation from rotten and botrytized grapes consistently had a higher presence of the fungi Zygosaccharomyces, Penicillium and Aspergillus while high abundance of Botrytis were observed just for botrytized grapes. As expected, the acetic acid bacteria number increased in musts from rotten and botrytized grapes, mostly due to changes in proportion of the genus Gluconoacetobacter which remained more abundant during damaged grapes fermentation than during healthy ones. Interestingly, the presence of Oenococcus oeni at the end of the alcoholic fermentation was strongly affected by the health status of the grapes.
    Àrees temàtiques: Zootecnia / recursos pesqueiros Saúde coletiva Safety, risk, reliability and quality Química Odontología Nutrição Microbiology Medicine (miscellaneous) Medicina veterinaria Medicina ii Medicina i Interdisciplinar Geociências General medicine Food science & technology Food science Farmacia Engenharias ii Ciências biológicas iii Ciências biológicas ii Ciências biológicas i Ciências agrárias i Ciência de alimentos Biotecnología Biodiversidade
    Accès a la llicència d'ús: https://creativecommons.org/licenses/by/3.0/es/
    ISSN: 01681605
    Adreça de correu electrònic de l'autor: carmen.portillo@urv.cat albert.mas@urv.cat
    Identificador de l'autor: 0000-0002-4576-0244 0000-0002-0763-1679
    Data d'alta del registre: 2024-09-07
    Versió de l'article dipositat: info:eu-repo/semantics/acceptedVersion
    Enllaç font original: https://www.sciencedirect.com/science/article/abs/pii/S0168160518302757
    URL Document de llicència: https://repositori.urv.cat/ca/proteccio-de-dades/
    Referència a l'article segons font original: International Journal Of Food Microbiology. 281 36-46
    Referència de l'ítem segons les normes APA: Lleixa, Jessica; Kioroglou, Dimitrios; Mas, Albert; del Carmen Portillo, Maria (2018). Microbiome dynamics during spontaneous fermentations of sound grapes in comparison with sour rot and Botrytis infected grapes. International Journal Of Food Microbiology, 281(), 36-46. DOI: 10.1016/j.ijfoodmicro.2018.05.016
    DOI de l'article: 10.1016/j.ijfoodmicro.2018.05.016
    Entitat: Universitat Rovira i Virgili
    Any de publicació de la revista: 2018
    Tipus de publicació: Journal Publications
  • Paraules clau:

    Food Science,Food Science & Technology,Medicine (Miscellaneous),Microbiology,Safety, Risk, Reliability and Quality
    Yeasts
    Wine fermentation
    Wine
    Vitis
    Time quantitative pcr
    Sour rot
    Red wine
    Population-dynamics
    Non-saccharomyces yeasts
    Microbiota
    Massive sequencing
    Lactic acid bacteria
    Gradient gel-electrophoresis
    Food microbiology
    Fermentation
    Enumeration
    Botrytis
    Biodiversity
    Alcoholic fermentation
    Acetic-acid bacteria
    Acetic acid bacteria
    16s ribosomal-rna
    sour rot
    massive sequencing
    lactic acid bacteria
    botrytis
    acetic acid bacteria
    Zootecnia / recursos pesqueiros
    Saúde coletiva
    Safety, risk, reliability and quality
    Química
    Odontología
    Nutrição
    Microbiology
    Medicine (miscellaneous)
    Medicina veterinaria
    Medicina ii
    Medicina i
    Interdisciplinar
    Geociências
    General medicine
    Food science & technology
    Food science
    Farmacia
    Engenharias ii
    Ciências biológicas iii
    Ciências biológicas ii
    Ciências biológicas i
    Ciências agrárias i
    Ciência de alimentos
    Biotecnología
    Biodiversidade
  • Documents:

  • Cerca a google

    Search to google scholar