Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic fusarium that includes the fusarium solani species complex

Autor segons l'article: Geiser, David M; Al-Hatmi, Abdullah M S; Aoki, Takayuki; Arie, Tsutomu; Balmas, Virgilio; Barnes, Irene; Bergstrom, Gary C; Bhattacharyya, Madan K; Blomquist, Cheryl L; Bowden, Robert L; Brankovics, Balazs; Brown, Daren W; Burgess, Lester W; Bushley, Kathryn; Busman, Mark; Cano-Lira, Jose F; Carrillo, Joseph D; Chang, Hao-Xun; Chen, Chi-Yu; Chen, Wanquan; Chilvers, Martin; Chulze, Sofia; Coleman, Jeffrey J; Cuomo, Christina A; de Beer, Z Wilhelm; de Hoog, G Sybren; Del Castillo-Munera, Johanna; Del Ponte, Emerson M; Dieguez-Uribeondo, Javier; Di Pietro, Antonio; Edel-Hermann, Veronique; Elmer, Wade H; Epstein, Lynn; Eskalen, Akif; Esposto, Maria Carmela; Everts, Kathryne L; Fernandez-Pavia, Sylvia P; da Silva, Gilvan Ferreira; Foroud, Nora A; Fourie, Gerda; Frandsen, Rasmus J N; Freeman, Stanley; Freitag, Michael; Frenkel, Omer; Fuller, Kevin K; Gagkaeva, Tatiana; Gardiner, Donald M; Glenn, Anthony E; Gold, Scott E; Gordon, Thomas R; Gregory, Nancy F; Gryzenhout, Marieka; Guarro, Josep; Gugino, Beth K; Gutierrez, Santiago; Hammond-Kosack, Kim E; Harris, Linda J; Homa, Monika; Hong, Cheng-Fang; Hornok, Laszlo; Huang, Jenn-Wen; Ilkit, Macit; Jacobs, Adriaana; Jacobs, Karin; Jiang, Cong; Jimenez-Gasco, Maria Del Mar; Kang, Seogchan; Kasson, Matthew T; Kazan, Kemal; Kennell, John C; Kim, Hye-Seon; Kistler, H Corby; Kuldau, Gretchen A; Kulik, Tomasz; Kurzai, Oliver; Laraba, Imane; Laurence, Matthew H; Lee, Theresa; Lee, Yin-Won; Lee, Yong-Hwan; Leslie, John F; Liew, Edward C Y; Lofton, Lily W; Logrieco, Antonio F; Lopez-Berges, Manuel S; Luque, Alicia G; Lysoe, Erik; Ma, Li-Jun; Marra, Robert E; Martin, Frank N; May, Sara R; McCormick, Susan P; McGee, Chyanna; Meis, Jacques F; Migheli, Quirico; Nor, N M I Mohamed; Monod, Michel; Moretti, Antonio; Mostert, Diane; Mule, Giuseppina; Munkvold, Gary P; Nicholson, Paul; Nucci, Marcio; O'Donnell, Kerry; Pasquali, Matias; Pfenning, Ludwig H; Prigitano, Anna; Proctor, Robert H; Ranque, Stephane; Rehner, Stephen A; Rep, Martijn; Rodriguez-Alvarado, Gerardo; Rose, Lindy Joy; Roth, Mitchell G; Ruiz-Roldan, Carmen; Saleh, Amgad A; Salleh, Baharuddin; Sang, Hyunkyu; Scandiani, Maria Mercedes; Scauflaire, Jonathan; Schmale, David G, III; Short, Dylan P G; Sisic, Adnan; Smith, Jason A; Smyth, Christopher W; Son, Hokyoung; Spahr, Ellie; Stajich, Jason E; Steenkamp, Emma; Steinberg, Christian; Subramaniam, Rajagopal; Suga, Haruhisa; Summerell, Brett A; Susca, Antonella; Swett, Cassandra L; Toomajian, Christopher; Torres-Cruz, Terry J; Tortorano, Anna M; Urban, Martin; Vaillancourt, Lisa J; Vallad, Gary E; van der Lee, Theo A J; Vanderpool, Dan; van Diepeningen, Anne D; Vaughan, Martha M; Venter, Eduard; Vermeulen, Marcele; Verweij, Paul E; Viljoen, Altus; Waalwijk, Cees; Wallace, Emma C; Walther, Grit; Wang, Jie; Ward, Todd J; Wickes, Brian L; Wiederhold, Nathan P; Wingfield, Michael J; Wood, Ana K M; Xu, Jin-Rong; Yang, Xiao-Bing; Yli-Mattila, Tapani; Yun, Sung-Hwan; Zakaria, Latiffah; Zhang, Hao; Zhang, Ning; Zhang, Sean X; Zhang, Xue

Departament: Ciències Mèdiques Bàsiques

Autor/s de la URV: Cano Lira, José Francisco / Guarro Artigas, Josep

Paraules clau: Plants; Plant diseases; Phylogeny; Fusarium; Fungal pathogens; Evolution

Resum: Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user’s needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option available.

Àrees temàtiques: Saúde coletiva; Química; Plant sciences; Plant science; Medicina ii; Medicina i; Materiais; General medicine; Farmacia; Ciências biológicas iii; Ciências biológicas ii; Ciências biológicas i; Ciências ambientais; Ciências agrárias i; Ciência da computação; Biotecnología; Biodiversidade; Agronomy and crop science

Accès a la llicència d'ús: https://creativecommons.org/licenses/by/3.0/es/

Adreça de correu electrònic de l'autor: jose.cano@urv.cat

Data d'alta del registre: 2025-02-18

Versió de l'article dipositat: info:eu-repo/semantics/acceptedVersion

Enllaç font original: https://apsjournals.apsnet.org/doi/pdf/10.1094/PHYTO-08-20-0330-LE

URL Document de llicència: https://repositori.urv.cat/ca/proteccio-de-dades/

Referència a l'article segons font original: Phytopathology. 111 (7): 1064-1079

Referència de l'ítem segons les normes APA: Geiser, David M; Al-Hatmi, Abdullah M S; Aoki, Takayuki; Arie, Tsutomu; Balmas, Virgilio; Barnes, Irene; Bergstrom, Gary C; Bhattacharyya, Madan K; Bl (2021). Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic fusarium that includes the fusarium solani species complex. Phytopathology, 111(7), 1064-1079. DOI: 10.1094/phyto-08-20-0330-le

DOI de l'article: 10.1094/phyto-08-20-0330-le

Entitat: Universitat Rovira i Virgili

Any de publicació de la revista: 2021

Tipus de publicació: Journal Publications