Articles producció científicaCiències Mèdiques Bàsiques

Re-examination of species limits in Aspergillus section Flavipedes using advanced species delimitation methods and description of four new species

  • Dades identificatives

    Identificador:  imarina:9242216
    Autors:  Sklená? F; Jurjevi? Ž; Houbraken J; Kola?ík M; Arendrup MC; Jørgensen KM; Siqueira JPZ; Gené J; Yaguchi T; Ezekiel CN; Silva Pereira C; Hubka V
    Resum:
    Since the last revision in 2015, the taxonomy of section Flavipedes evolved rapidly along with the availability of new species delimitation techniques. This study aims to re-evaluate the species boundaries of section Flavipedes members using modern delimitation methods applied to an extended set of strains (n = 90) collected from various environments. The analysis used DNA sequences of three house-keeping genes (benA, CaM, RPB2) and consisted of two steps: application of several single-locus (GMYC, bGMYC, PTP, bPTP) and multi-locus (STACEY) species delimitation methods to sort the isolates into putative species, which were subsequently validated using DELINEATE software that was applied for the first time in fungal taxonomy. As a result, four new species are introduced, i.e. A. alboluteus, A. alboviridis, A. inusitatus and A. lanuginosus, and A. capensis is synonymized with A. iizukae. Phenotypic analyses were performed for the new species and their relatives, and the results showed that the growth parameters at different temperatures and colonies characteristics were useful for differentiation of these taxa. The revised section harbors 18 species, most of them are known from soil. However, the most common species from the section are ecologically diverse, occurring in the indoor environment (six species), clinical samples (five species), food and feed (four species), droppings (four species) and other less common substrates/environments. Due to the occurrence of section Flavipedes species in the clinical material/hospital environment, we also evaluated the susceptibility of 67 strains to six antifungals (amphotericin B, itraconazole, posaconazole, voriconazole, isavuconazole, terbinafine) using the reference EUCAST method. These results showed some potentially clinically relevant differences in susceptibility between species. For example, MICs higher than those observed for A. fumigatus wild-type were found for both triazoles and amphotericin B for A. ardalensis, A. iizukae, and A. spelaeus whereas A. lanuginosus, A. luppiae, A. movilensis, A. neoflavipes, A. olivimuriae and A. suttoniae were comparable to or more susceptible as A. fumigatus. Finally, terbinafine was in vitro active against all species except A. alboviridis. © 2021 THE AUTHORS
  • Altres:

    Enllaç font original: https://www.sciencedirect.com/science/article/abs/pii/S0013935121009130?via%3Dihub
    Referència de l'ítem segons les normes APA: Sklená? F; Jurjevi? Ž; Houbraken J; Kola?ík M; Arendrup MC; Jørgensen KM; Siqueira JPZ; Gené J; Yaguchi T; Ezekiel CN; Silva Pereira C; Hubka V (2021). Re-examination of species limits in Aspergillus section Flavipedes using advanced species delimitation methods and description of four new species. Studies In Mycology, 99(99), -. DOI: 10.1016/j.simyco.2021.100120
    Referència a l'article segons font original: Studies In Mycology. 99 (99):
    DOI de l'article: 10.1016/j.simyco.2021.100120
    Any de publicació de la revista: 2021
    Entitat: Universitat Rovira i Virgili
    Versió de l'article dipositat: info:eu-repo/semantics/publishedVersion
    Data d'alta del registre: 2024-07-27
    Autor/s de la URV: Gené Díaz, Josepa / ZEN SIQUEIRA, JOAO PAULO
    Departament: Ciències Mèdiques Bàsiques
    URL Document de llicència: https://repositori.urv.cat/ca/proteccio-de-dades/
    Tipus de publicació: Journal Publications
    Autor segons l'article: Sklená? F; Jurjevi? Ž; Houbraken J; Kola?ík M; Arendrup MC; Jørgensen KM; Siqueira JPZ; Gené J; Yaguchi T; Ezekiel CN; Silva Pereira C; Hubka V
    Accès a la llicència d'ús: https://creativecommons.org/licenses/by/3.0/es/
    Àrees temàtiques: Plant science, Mycology, Interdisciplinar, Ciências biológicas iii, Ciências agrárias i, Biotecnología, Agricultural and biological sciences (miscellaneous)
    Adreça de correu electrònic de l'autor: josepa.gene@urv.cat
  • Paraules clau:

    Species delimitation
    Soil-borne fungi
    Multigene phylogeny
    Indoor fungi
    Clinical fungi
    Aspergillus flavipes
    Antifungal susceptibility testing
    Amphotericin-b
    tree
    talaromyces
    susceptibility
    soil
    recognition
    penicillium
    itraconazole
    identification
    fungi
    Agricultural and Biological Sciences (Miscellaneous)
    Mycology
    Plant Science
    Interdisciplinar
    Ciências biológicas iii
    Ciências agrárias i
    Biotecnología
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