Articles producció científica> Ciències Mèdiques Bàsiques

Aliarcobacter vitoriensis sp. nov., isolated from carrot and urban wastewater

  • Identification data

    Identifier: imarina:6390306
  • Authors:

    Alonso R
    Girbau C
    Martinez-Malaxetxebarria I
    Pérez-Cataluña A
    Salas-Massó N
    Romalde JL
    Figueras MJ
    Fernandez-Astorga A
    Systematic And Applied Microbiology
    10.1016/j.syapm.2020.126091
    Systematic And Applied Microbiology. 43 (4):
  • Others:

    Author, as appears in the article.: Alonso R; Girbau C; Martinez-Malaxetxebarria I; Pérez-Cataluña A; Salas-Massó N; Romalde JL; Figueras MJ; Fernandez-Astorga A
    Department: Ciències Mèdiques Bàsiques
    URV's Author/s: Figueras Salvat, María Josefa / PÉREZ CATALUÑA, ALBA
    Keywords: Wastewater Virulence genes Taxonomy Products Minimal standards Indoxyl acetate Hydrolysis Helicobacter Genetic diversity Carrot Campylobacter Arcobacter-butzleri Arcobacter Aliarcobacter vitoriensis sp. nov
    Abstract: © 2020 Elsevier GmbH Two isolates, one recovered from a carrot and another one from urban wastewater, were characterized using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that both isolates clustered together, and were most closely related to Aliarcobacter lanthieri. Multilocus phylogenetic analysis (MLPA) using the concatenated sequences of five housekeeping genes (atpA, gyrA, gyrB, hsp60 and rpoB) suggested that these isolates formed a distinct phylogenetic lineage among the genera derived from the former genus Arcobacter. Whole-genome sequence, in silico DNA-DNA hybridization (isDDH) and the average nucleotide identity (ANI) value between the genome of strain F199T and those of related species confirmed that these isolates represent a novel species. These strains can be differentiated from its phylogenetically closest species A. lanthieri by its inability to growth on 1% glycine and by their enzyme activity of esterase lipase (C8) and acid phosphatase. Our results, by the application of a polyphasic analysis, confirmed that these two isolates represent a novel species of the genus Aliarcobacter, for which the name Aliarcobacter vitoriensis sp. nov. is proposed. The type strain is F199T (=CECT 9230T=LMG 30050T).
    Thematic Areas: Zootecnia / recursos pesqueiros Microbiology Interdisciplinar Engenharias iii Engenharias ii Ecology, evolution, behavior and systematics Ciências biológicas iii Ciências biológicas ii Ciências biológicas i Ciências ambientais Ciências agrárias i Biotecnología Biotechnology & applied microbiology Biodiversidade Applied microbiology and biotechnology
    licence for use: https://creativecommons.org/licenses/by/3.0/es/
    Author's mail: mariajose.figueras@urv.cat
    Author identifier: 0000-0002-2268-8980
    Record's date: 2023-02-26
    Papper version: info:eu-repo/semantics/acceptedVersion
    Link to the original source: https://www.sciencedirect.com/science/article/abs/pii/S0723202020300424?via%3Dihub
    Papper original source: Systematic And Applied Microbiology. 43 (4):
    APA: Alonso R; Girbau C; Martinez-Malaxetxebarria I; Pérez-Cataluña A; Salas-Massó N; Romalde JL; Figueras MJ; Fernandez-Astorga A (2020). Aliarcobacter vitoriensis sp. nov., isolated from carrot and urban wastewater. Systematic And Applied Microbiology, 43(4), -. DOI: 10.1016/j.syapm.2020.126091
    Licence document URL: https://repositori.urv.cat/ca/proteccio-de-dades/
    Article's DOI: 10.1016/j.syapm.2020.126091
    Entity: Universitat Rovira i Virgili
    Journal publication year: 2020
    Publication Type: Journal Publications
  • Keywords:

    Applied Microbiology and Biotechnology,Biotechnology & Applied Microbiology,Ecology, Evolution, Behavior and Systematics,Microbiology
    Wastewater
    Virulence genes
    Taxonomy
    Products
    Minimal standards
    Indoxyl acetate
    Hydrolysis
    Helicobacter
    Genetic diversity
    Carrot
    Campylobacter
    Arcobacter-butzleri
    Arcobacter
    Aliarcobacter vitoriensis sp. nov
    Zootecnia / recursos pesqueiros
    Microbiology
    Interdisciplinar
    Engenharias iii
    Engenharias ii
    Ecology, evolution, behavior and systematics
    Ciências biológicas iii
    Ciências biológicas ii
    Ciências biológicas i
    Ciências ambientais
    Ciências agrárias i
    Biotecnología
    Biotechnology & applied microbiology
    Biodiversidade
    Applied microbiology and biotechnology
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