Articles producció científica> Ciències Mèdiques Bàsiques

Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic fusarium that includes the fusarium solani species complex

  • Identification data

    Identifier: imarina:9231690
  • Authors:

    Geiser DM
    Al-Hatmi AMS
    Aoki T
    Arie T
    Balmas V
    Barnes I
    Bergstrom GC
    Bhattacharyya MK
    Blomquist CL
    Bowden RL
    Brankovics B
    Brown DW
    Burgess LW
    Bushley K
    Busman M
    Cano-Lira JF
    Carrillo JD
    Chang HX
    Chen CY
    Chen W
    Chilvers M
    Chulze S
    Coleman JJ
    Cuomo CA
    Wilhelm de Beer Z
    Sybren de Hoog G
    Castillo-Munera JD
    Del Ponte EM
    Dieguez-Uribeondo J
    Pietro AD
    Edel-Hermann V
    Elmer WH
    Epstein L
    Eskalen A
    Esposto MC
    Everts KL
    Fernandez-Pavıa SP
    da Silva GF
    Foroud NA
    Fourie G
    Frandsen RJN
    Freeman S
    Freitag M
    Frenkel O
    Fuller KK
    Gagkaeva T
    Gardiner DM
    Glenn AE
    Gold SE
    Gordon TR
    Gregory NF
    Gryzenhout M
    Guarro J
    Gugino BK
    Gutierrez S
    Hammond-Kosack KE
    Harris LJ
    Homa M
    Hong CF
    Hornok L
    Huang JW
    Ilkit M
    Jacobs A
    Jacobs K
    Jiang C
    del Mar Jimenez-Gasco M
    Kang S
    Kasson MT
    Kazan K
    Kennell JC
    Kim HS
    Corby Kistler H
    Kuldau GA
    Kulik T
    Kurzai O
    Laraba I
    Laurence MH
    Lee T
    Lee YW
    Lee YH
    Leslie JF
    Liew ECY
    Lofton LW
    Logrieco AF
    Lopez-Berges MS
    Luque AG
    Lysøe E
    Ma LJ
    Marra RE
    Martin FN
    May SR
    McCormick SP
    McGee C
    Meis JF
    Migheli Q
    Mohamed Nor NMI
    Monod M
    Moretti A
    Mostert D
    Mule G
  • Others:

    Author, as appears in the article.: Geiser DM; Al-Hatmi AMS; Aoki T; Arie T; Balmas V; Barnes I; Bergstrom GC; Bhattacharyya MK; Blomquist CL; Bowden RL; Brankovics B; Brown DW; Burgess LW; Bushley K; Busman M; Cano-Lira JF; Carrillo JD; Chang HX; Chen CY; Chen W; Chilvers M; Chulze S; Coleman JJ; Cuomo CA; Wilhelm de Beer Z; Sybren de Hoog G; Castillo-Munera JD; Del Ponte EM; Dieguez-Uribeondo J; Pietro AD; Edel-Hermann V; Elmer WH; Epstein L; Eskalen A; Esposto MC; Everts KL; Fernandez-Pavıa SP; da Silva GF; Foroud NA; Fourie G; Frandsen RJN; Freeman S; Freitag M; Frenkel O; Fuller KK; Gagkaeva T; Gardiner DM; Glenn AE; Gold SE; Gordon TR; Gregory NF; Gryzenhout M; Guarro J; Gugino BK; Gutierrez S; Hammond-Kosack KE; Harris LJ; Homa M; Hong CF; Hornok L; Huang JW; Ilkit M; Jacobs A; Jacobs K; Jiang C; del Mar Jimenez-Gasco M; Kang S; Kasson MT; Kazan K; Kennell JC; Kim HS; Corby Kistler H; Kuldau GA; Kulik T; Kurzai O; Laraba I; Laurence MH; Lee T; Lee YW; Lee YH; Leslie JF; Liew ECY; Lofton LW; Logrieco AF; Lopez-Berges MS; Luque AG; Lysøe E; Ma LJ; Marra RE; Martin FN; May SR; McCormick SP; McGee C; Meis JF; Migheli Q; Mohamed Nor NMI; Monod M; Moretti A; Mostert D; Mule G
    Department: Ciències Mèdiques Bàsiques
    URV's Author/s: Cano Lira, José Francisco / Guarro Artigas, Josep
    Keywords: Fungal pathogens Evolution
    Abstract: Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user’s needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option available.
    Thematic Areas: Saúde coletiva Química Plant sciences Plant science Medicina ii Medicina i Materiais General medicine Farmacia Ciências biológicas iii Ciências biológicas ii Ciências biológicas i Ciências ambientais Ciências agrárias i Ciência da computação Biotecnología Biodiversidade Agronomy and crop science
    licence for use: https://creativecommons.org/licenses/by/3.0/es/
    Author's mail: josep.guarro@urv.cat jose.cano@urv.cat
    Author identifier: 0000-0002-7839-7568 0000-0003-4495-4394
    Record's date: 2024-06-28
    Papper version: info:eu-repo/semantics/acceptedVersion
    Link to the original source: https://apsjournals.apsnet.org/doi/pdf/10.1094/PHYTO-08-20-0330-LE
    Licence document URL: http://repositori.urv.cat/ca/proteccio-de-dades/
    Papper original source: Phytopathology. 111 (7): 1064-1079
    APA: Geiser DM; Al-Hatmi AMS; Aoki T; Arie T; Balmas V; Barnes I; Bergstrom GC; Bhattacharyya MK; Blomquist CL; Bowden RL; Brankovics B; Brown DW; Burgess (2021). Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic fusarium that includes the fusarium solani species complex. Phytopathology, 111(7), 1064-1079. DOI: 10.1094/phyto-08-20-0330-le
    Article's DOI: 10.1094/phyto-08-20-0330-le
    Entity: Universitat Rovira i Virgili
    Journal publication year: 2021
    Publication Type: Journal Publications
  • Keywords:

    Agronomy and Crop Science,Plant Science,Plant Sciences
    Fungal pathogens
    Evolution
    Saúde coletiva
    Química
    Plant sciences
    Plant science
    Medicina ii
    Medicina i
    Materiais
    General medicine
    Farmacia
    Ciências biológicas iii
    Ciências biológicas ii
    Ciências biológicas i
    Ciências ambientais
    Ciências agrárias i
    Ciência da computação
    Biotecnología
    Biodiversidade
    Agronomy and crop science
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