Articles producció científica> Enginyeria Electrònica, Elèctrica i Automàtica

Metabolite discovery: Biochemistry's scientific driver

  • Identification data

    Identifier: imarina:9242580
    Authors:
    Giera, MartinYanes, OscarSiuzdak, Gary
    Abstract:
    Metabolite identification represents a major challenge, and opportunity, for biochemistry. The collective characterization and quantification of metabolites in living organisms, with its many successes, represents a major biochemical knowledgebase and the foundation of metabolism's rebirth in the 21st century; yet, characterizing newly observed metabolites has been an enduring obstacle. Crystallography and NMR spectroscopy have been of extraordinary importance, although their applicability in resolving metabolism's fine structure has been restricted by their intrinsic requirement of sufficient and sufficiently pure materials. Mass spectrometry has been a key technology, especially when coupled with high-performance separation technologies and emerging informatic and database solutions. Even more so, the collective of artificial intelligence technologies are rapidly evolving to help solve the metabolite characterization conundrum. This perspective describes this challenge, how it was historically addressed, and how metabolomics is evolving to address it today and in the future.Copyright © 2021. Published by Elsevier Inc.
  • Others:

    Author, as appears in the article.: Giera, Martin; Yanes, Oscar; Siuzdak, Gary
    Department: Enginyeria Electrònica, Elèctrica i Automàtica
    URV's Author/s: Yanes Torrado, Óscar
    Keywords: Unknowns Structure Nuclear magnetic resonance Metabolites Mass-spectrometry data Mass spectrometry Biochemistry Artificial intelligence platform nmr-spectroscopy metabolomics induced dissociation identification deconvolution computational tool chromatography acids
    Abstract: Metabolite identification represents a major challenge, and opportunity, for biochemistry. The collective characterization and quantification of metabolites in living organisms, with its many successes, represents a major biochemical knowledgebase and the foundation of metabolism's rebirth in the 21st century; yet, characterizing newly observed metabolites has been an enduring obstacle. Crystallography and NMR spectroscopy have been of extraordinary importance, although their applicability in resolving metabolism's fine structure has been restricted by their intrinsic requirement of sufficient and sufficiently pure materials. Mass spectrometry has been a key technology, especially when coupled with high-performance separation technologies and emerging informatic and database solutions. Even more so, the collective of artificial intelligence technologies are rapidly evolving to help solve the metabolite characterization conundrum. This perspective describes this challenge, how it was historically addressed, and how metabolomics is evolving to address it today and in the future.Copyright © 2021. Published by Elsevier Inc.
    Thematic Areas: Physiology Odontología Molecular biology Medicina ii Medicina i Interdisciplinar General medicine Endocrinology & metabolism Educação física Ciências biológicas ii Ciências biológicas i Cell biology
    licence for use: https://creativecommons.org/licenses/by/3.0/es/
    Author's mail: oscar.yanes@urv.cat
    Author identifier: 0000-0003-3695-7157
    Record's date: 2024-10-12
    Papper version: info:eu-repo/semantics/submittedVersion
    Link to the original source: https://www.sciencedirect.com/science/article/abs/pii/S1550413121005337
    Licence document URL: https://repositori.urv.cat/ca/proteccio-de-dades/
    Papper original source: Cell Metabolism. 34 (1): 21-34
    APA: Giera, Martin; Yanes, Oscar; Siuzdak, Gary (2022). Metabolite discovery: Biochemistry's scientific driver. Cell Metabolism, 34(1), 21-34. DOI: 10.1016/j.cmet.2021.11.005
    Article's DOI: 10.1016/j.cmet.2021.11.005
    Entity: Universitat Rovira i Virgili
    Journal publication year: 2022
    Publication Type: Journal Publications
  • Keywords:

    Cell Biology,Endocrinology & Metabolism,Molecular Biology,Physiology
    Unknowns
    Structure
    Nuclear magnetic resonance
    Metabolites
    Mass-spectrometry data
    Mass spectrometry
    Biochemistry
    Artificial intelligence
    platform
    nmr-spectroscopy
    metabolomics
    induced dissociation
    identification
    deconvolution
    computational tool
    chromatography
    acids
    Physiology
    Odontología
    Molecular biology
    Medicina ii
    Medicina i
    Interdisciplinar
    General medicine
    Endocrinology & metabolism
    Educação física
    Ciências biológicas ii
    Ciências biológicas i
    Cell biology
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