Articles producció científicaEnginyeria Química

Green-Kubo expressions for transport coefficients from dissipative particle dynamics simulations revisited

  • Identification data

    Identifier:  imarina:9333649
    Authors:  Malaspina, DC; Lisal, M; Larentzos, JP; Brennan, JK; Mackie, AD; Avalos, JB
    Abstract:
    This article addresses the debate about the correct application of Green-Kubo expressions for transport coefficients from dissipative particle dynamics simulations. We demonstrate that the Green-Kubo expressions are valid provided that (i) the dynamic model conserves the physical property, whose transport is studied, and (ii) the fluctuations satisfy detailed balance. As a result, the traditional expressions used in molecular dynamics can also be applied to dissipative particle dynamics simulations. However, taking the calculation of the shear viscosity as a paradigmatic example, a random contribution, whose strength scales as 1/δt1/2, with δt the time-step, can cause difficulties if the stress tensor is not separated into the different contributions. We compare our expression to that of Ernst and Brito (M. H. Ernst and R. Brito, Europhys. Lett., 2006, 73, 183-189), which arises from a diametrically different perspective. We demonstrate that the two expressions are completely equivalent and find exactly the same result both analytically and numerically. We show that the differences are not due to the lack of time-reversibility but instead from a pre-averaging of the random contributions. Despite the overall validity of Green-Kubo expressions, we find that the Einstein-Helfand relations (D. C. Malaspina et al. Phys. Chem. Chem. Phys., 2023, 25, 12025-12040) do not suffer from the need to decompose the stress tensor and can readily be used with a high degree of accuracy. Consequently, Einstein-Helfand relations should be seen as the preferred method to calculate transport coefficients from dissipative particle dynamics simulations.
  • Others:

    Link to the original source: https://pubs.rsc.org/en/Content/ArticleLanding/2023/CP/D3CP03791F
    APA: Malaspina, DC; Lisal, M; Larentzos, JP; Brennan, JK; Mackie, AD; Avalos, JB (2024). Green-Kubo expressions for transport coefficients from dissipative particle dynamics simulations revisited. Physical Chemistry Chemical Physics, 26(2), 1328-1339. DOI: 10.1039/d3cp03791f
    Paper original source: Physical Chemistry Chemical Physics. 26 (2): 1328-1339
    Article's DOI: 10.1039/d3cp03791f
    Journal publication year: 2024-01-03
    Entity: Universitat Rovira i Virgili
    Paper version: info:eu-repo/semantics/publishedVersion
    Record's date: 2026-05-09
    URV's Author/s: Bonet Avalos, José / Mackie Walker, Allan Donald
    Department: Enginyeria Química
    Licence document URL: https://repositori.urv.cat/ca/proteccio-de-dades/
    Publication Type: Journal Publications
    Author, as appears in the article.: Malaspina, DC; Lisal, M; Larentzos, JP; Brennan, JK; Mackie, AD; Avalos, JB
    licence for use: https://creativecommons.org/licenses/by/3.0/es/
    Thematic Areas: Physics, atomic, molecular & chemical, Physics and astronomy (miscellaneous), Physics and astronomy (all), Physical and theoretical chemistry, General physics and astronomy, General medicine, Ciências agrárias i, Chemistry, physical, Biotecnología, Astronomia / física
    Author's mail: allan.mackie@urv.cat, allan.mackie@urv.cat, josep.bonet@urv.cat, josep.bonet@urv.cat
  • Keywords:

    Energy-conservation
    Chemistry
    Physical
    Physical and Theoretical Chemistry
    Physics and Astronomy (Miscellaneous)
    Physics
    Atomic
    Molecular & Chemical
    Physics and astronomy (all)
    General physics and astronomy
    General medicine
    Ciências agrárias i
    Biotecnología
    Astronomia / física
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