Articles producció científica> Enginyeria Informàtica i Matemàtiques

Graphfingerprint: graph embedding of graphs with almost constant sub-structures

  • Identification data

    Identifier: imarina:9393174
    Authors:
    Serratosa, Francesc
    Abstract:
    In some machine learning applications, graphs tend to be composed of a large number of tiny almost constant sub-structures. The current embedding methods are not prepared for this type of graphs and thus, their representational power tends to be very low. Our aim is to define a new graph embedding that considers this specific type of graphs. We present GraphFingerprint, which is a new embedding method that specifically considers the fact that graphs are composed of millions of almost constant sub-structures. The three-dimensional characterisation of a chemical metal-oxide nanocompound easily fits in these types of graphs, which nodes are atoms and edges are their bonds. Our graph embedding method has been used to predict the toxicity of these nanocompounds, achieving a high accuracy compared to other embedding methods. The representational power of the current embedding methods do not properly satisfy the requirements of some machine learning applications based on graphs, for this reason, a new embedding method has been defined and heuristically demonstrated that achieves good accuracy.
  • Others:

    Author, as appears in the article.: Serratosa, Francesc
    Department: Enginyeria Informàtica i Matemàtiques
    URV's Author/s: Serratosa Casanelles, Francesc d'Assís
    Keywords: Chemical 3d-structure Edit costs Graph classification Graph embedding Graph regression Graphfingerprint Metal-oxide nanocompound Mode Nanofingerprin Nanofingerprint Nanoparticles
    Abstract: In some machine learning applications, graphs tend to be composed of a large number of tiny almost constant sub-structures. The current embedding methods are not prepared for this type of graphs and thus, their representational power tends to be very low. Our aim is to define a new graph embedding that considers this specific type of graphs. We present GraphFingerprint, which is a new embedding method that specifically considers the fact that graphs are composed of millions of almost constant sub-structures. The three-dimensional characterisation of a chemical metal-oxide nanocompound easily fits in these types of graphs, which nodes are atoms and edges are their bonds. Our graph embedding method has been used to predict the toxicity of these nanocompounds, achieving a high accuracy compared to other embedding methods. The representational power of the current embedding methods do not properly satisfy the requirements of some machine learning applications based on graphs, for this reason, a new embedding method has been defined and heuristically demonstrated that achieves good accuracy.
    Thematic Areas: Administração pública e de empresas, ciências contábeis e turismo Artificial intelligence Ciência da computação Ciências biológicas i Computer science, artificial intelligence Computer vision and pattern recognition Engenharias iv Interdisciplinar Matemática / probabilidade e estatística Medicina i
    licence for use: https://creativecommons.org/licenses/by/3.0/es/
    Author's mail: francesc.serratosa@urv.cat
    Author identifier: 0000-0001-6112-5913
    Record's date: 2025-01-28
    Paper version: info:eu-repo/semantics/publishedVersion
    Paper original source: Pattern Analysis And Applications. 27 (4): 143-
    APA: Serratosa, Francesc (2024). Graphfingerprint: graph embedding of graphs with almost constant sub-structures. Pattern Analysis And Applications, 27(4), 143-. DOI: 10.1007/s10044-024-01366-w
    Licence document URL: https://repositori.urv.cat/ca/proteccio-de-dades/
    Entity: Universitat Rovira i Virgili
    Journal publication year: 2024
    Publication Type: Journal Publications
  • Keywords:

    Artificial Intelligence,Computer Science, Artificial Intelligence,Computer Vision and Pattern Recognition
    Chemical 3d-structure
    Edit costs
    Graph classification
    Graph embedding
    Graph regression
    Graphfingerprint
    Metal-oxide nanocompound
    Mode
    Nanofingerprin
    Nanofingerprint
    Nanoparticles
    Administração pública e de empresas, ciências contábeis e turismo
    Artificial intelligence
    Ciência da computação
    Ciências biológicas i
    Computer science, artificial intelligence
    Computer vision and pattern recognition
    Engenharias iv
    Interdisciplinar
    Matemática / probabilidade e estatística
    Medicina i
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