Articles producció científicaEnginyeria Química

Generalized Energy-Conserving Dissipative Particle Dynamics with Mass Transfer. Part 1: Theoretical Foundation and Algorithm

  • Dades identificatives

    Identificador:  imarina:9285732
    Autors:  Avalos, Josep Bonet; Lisal, Martin; Larentzos, James P; Mackie, Allan D; Brennan, John K
    Resum:
    An extension of the generalized energy-conserving dissipative particle dynamics method (GenDPDE) that allows mass transfer between mesoparticles via a diffusion process is presented. By considering the concept of the mesoparticles as property carriers, the complexity and flexibility of the GenDPDE framework were enhanced to allow for interparticle mass transfer under isoenergetic conditions, notated here as GenDPDE-M. In the formulation, diffusion is described via the theory of mesoscale irreversible processes based on linear relationships between the fluxes and thermodynamic forces, where their fluctuations are described by Langevin-like equations. The mass exchange between mesoparticles is such that the mass of the mesoparticle remains unchanged after the transfer process and requires additional considerations regarding the coupling with other system properties such as the particle internal energy. The proof-of-concept work presented in this article is the first part of a two-part article series. In Part 1, the development of the GenDPDE-M theoretical framework and the derivation of the algorithm are presented in detail. Part 2 of this article series is targeted for practitioners, where applications, demonstrations, and practical considerations for implementing the GenDPDE-M method are presented and discussed.
  • Altres:

    Autor segons l'article: Avalos, Josep Bonet; Lisal, Martin; Larentzos, James P; Mackie, Allan D; Brennan, John K
    Departament: Enginyeria Química
    Autor/s de la URV: Bonet Avalos, José / Mackie Walker, Allan Donald
    Paraules clau: Thermodynamics; High-temperature; Diffusion; Algorithms; simulation; models; conservation
    Resum: An extension of the generalized energy-conserving dissipative particle dynamics method (GenDPDE) that allows mass transfer between mesoparticles via a diffusion process is presented. By considering the concept of the mesoparticles as property carriers, the complexity and flexibility of the GenDPDE framework were enhanced to allow for interparticle mass transfer under isoenergetic conditions, notated here as GenDPDE-M. In the formulation, diffusion is described via the theory of mesoscale irreversible processes based on linear relationships between the fluxes and thermodynamic forces, where their fluctuations are described by Langevin-like equations. The mass exchange between mesoparticles is such that the mass of the mesoparticle remains unchanged after the transfer process and requires additional considerations regarding the coupling with other system properties such as the particle internal energy. The proof-of-concept work presented in this article is the first part of a two-part article series. In Part 1, the development of the GenDPDE-M theoretical framework and the derivation of the algorithm are presented in detail. Part 2 of this article series is targeted for practitioners, where applications, demonstrations, and practical considerations for implementing the GenDPDE-M method are presented and discussed.
    Àrees temàtiques: Química; Physics, atomic, molecular & chemical; Physical and theoretical chemistry; Medicina i; Materiais; Matemática / probabilidade e estatística; Interdisciplinar; Farmacia; Engenharias iii; Computer science applications; Ciências biológicas ii; Ciências biológicas i; Ciência da computação; Chemistry, physical; Chemistry, multidisciplinary; Biotecnología; Astronomia / física
    Accès a la llicència d'ús: https://creativecommons.org/licenses/by/3.0/es/
    Adreça de correu electrònic de l'autor: allan.mackie@urv.cat; josep.bonet@urv.cat
    Data d'alta del registre: 2024-10-12
    Versió de l'article dipositat: info:eu-repo/semantics/acceptedVersion
    Enllaç font original: https://pubs.acs.org/doi/abs/10.1021/acs.jctc.2c00452
    Referència a l'article segons font original: Journal Of Chemical Theory And Computation. 18 (12): 7639-7652
    Referència de l'ítem segons les normes APA: Avalos, Josep Bonet; Lisal, Martin; Larentzos, James P; Mackie, Allan D; Brennan, John K (2022). Generalized Energy-Conserving Dissipative Particle Dynamics with Mass Transfer. Part 1: Theoretical Foundation and Algorithm. Journal Of Chemical Theory And Computation, 18(12), 7639-7652. DOI: 10.1021/acs.jctc.2c00452
    URL Document de llicència: https://repositori.urv.cat/ca/proteccio-de-dades/
    DOI de l'article: 10.1021/acs.jctc.2c00452
    Entitat: Universitat Rovira i Virgili
    Any de publicació de la revista: 2022
    Tipus de publicació: Journal Publications
  • Paraules clau:

    Chemistry, Multidisciplinary,Chemistry, Physical,Computer Science Applications,Physical and Theoretical Chemistry,Physics, Atomic, Molecular & Chemical
    Thermodynamics
    High-temperature
    Diffusion
    Algorithms
    simulation
    models
    conservation
    Química
    Physics, atomic, molecular & chemical
    Physical and theoretical chemistry
    Medicina i
    Materiais
    Matemática / probabilidade e estatística
    Interdisciplinar
    Farmacia
    Engenharias iii
    Computer science applications
    Ciências biológicas ii
    Ciências biológicas i
    Ciência da computação
    Chemistry, physical
    Chemistry, multidisciplinary
    Biotecnología
    Astronomia / física
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