Conjunts de dades de producció científica> Medicina i Cirurgia

A Gas Chromatography – Ion Mobility Spectrometry dataset for colorectal cancer diagnostic of 56 urine samples corresponding to 29 subjects.

  • Identification data

    Identifier: PC:4144
    Authors:
    Gumà, Josep
    Abstract:
    The dataset includes the set of urine samples in .mea format, which can be read using the GCIMS R package. It also contains analytical standards in the same format, used for quality control of the equipment and as a retention time alignment reference. If you want to preview the data, you do not need to download the full Urines.zip and AnalyticalStandards.zip files, but rather use the smaller UrinesDemo.zip and AnalyticalStandardsDemo.zip, with a subset of just three samples of the whole dataset. Besides the actual measurements, you will find the annotations.csv and reference_peaks.csv files, with sample annotations and some reference peaks identified in the samples.
  • Others:

    Subject matter: Medicina
    Access rights: info:eu-repo/semantics/openAccess
    Researcher identifier: 0000-0001-7541-9832
    Published by (editorial): Universitat Rovira i Virgili (URV)
    Related publications: Oller-Moreno, S., Mallafré-Muro, C., Fernandez, L., Caballero, E., Blanco, A., Gumà, J., Marco, S., & Pardo, A. (2023). GCIMS: An R package for untargeted gas chromatography – Ion mobility spectrometry data processing. Chemometrics and Intelligent Laboratory Systems, 241, 104938. https://doi.org/10.1016/j.chemolab.2023.104938
    Abstract: The dataset includes the set of urine samples in .mea format, which can be read using the GCIMS R package. It also contains analytical standards in the same format, used for quality control of the equipment and as a retention time alignment reference. If you want to preview the data, you do not need to download the full Urines.zip and AnalyticalStandards.zip files, but rather use the smaller UrinesDemo.zip and AnalyticalStandardsDemo.zip, with a subset of just three samples of the whole dataset. Besides the actual measurements, you will find the annotations.csv and reference_peaks.csv files, with sample annotations and some reference peaks identified in the samples.
    Departament: Medicina i Cirurgia
    DOI: 10.5281/zenodo.7941230
    Document type: info:eu-repo/semantics/other
    Related publication's DOI: 10.1016/j.chemolab.2023.104938
    Repository ingest date: 2023-05-16
    Author: Gumà, Josep
    Keywords: GC-IMS, Urine, FlavourSpec
    Research group: Grup de recerca en Oncologia
    Dataset publication year: 2023
    Dataset title: A Gas Chromatography – Ion Mobility Spectrometry dataset for colorectal cancer diagnostic of 56 urine samples corresponding to 29 subjects.
  • Keywords:

    Medicina
    GC-IMS, Urine, FlavourSpec
  • Documents:

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