Articles producció científica> Ciències Mèdiques Bàsiques

Coelomycetous Dothideomycetes with emphasis on the families Cucurbitariaceae and Didymellaceae

  • Datos identificativos

    Identificador: imarina:4935615
    Autores:
    Valenzuela-Lopez N, Cano-Lira JF, Guarro J, Sutton DA, Wiederhold N, Crous PW, Stchigel AM
    Resumen:
    The taxonomy of the coelomycetes has undergone dramatic changes in recent years, but remains controversial due to the high number of taxa involved, their poor morphological differentiation, the rare occurrence of the sexual morphs, and rapid loss of fertility in vitro. In the present study, we revisited the families Cucurbitariaceae and Didymellaceae (Pleosporales, Dothideomycetes), which include numerous plant pathogens, endophytic species associated with a wide host range, and saprobes. The taxonomy of two of the most relevant genera, i.e. Phoma and Pyrenochaeta, remains ambiguous after several phylogenetic studies, and needs further revision. We have studied a total of 143 strains of coelomycetes from clinical or environmental origin, by combining the LSU, ITS, tub2 and rpb2 sequences for a multi-locus analysis and a detailed morphological comparison. The resulting phylogenetic tree revealed that some fungi previously considered as members of Cucurbitariaceae represented five different families, and four of them, Neopyrenochaetaceae, Parapyrenochaetaceae, Pseudopyrenochaetaceae and Pyrenochaetopsidaceae, are proposed here as new. Furthermore, 13 new genera, 28 new species, and 20 new combinations are proposed within the Pleosporineae. Moreover, four new typifications are introduced to stabilise the taxonomy of these fungi.
  • Otros:

    Autor según el artículo: Valenzuela-Lopez N, Cano-Lira JF, Guarro J, Sutton DA, Wiederhold N, Crous PW, Stchigel AM
    Departamento: Ciències Mèdiques Bàsiques
    Autor/es de la URV: Cano Lira, José Francisco / Guarro Artigas, Josep / Stchigel Glikman, Alberto Miguel / VALENZUELA LÓPEZ, NICOMEDES
    Palabras clave: Xenopyrenochaetopsis valenzuela-lopez, crous, stchigel, guarro & cano Xenopyrenochaetopsis pratorum (p.r. johnst. & boerema) valenzuela-lopez, crous, stchigel, guarro & cano Xenodidymella saxea (aveskamp et al.) valenzuela-lopez, crous, cano, guarro & stchigel Vacuiphoma valenzuela-lopez, cano, crous, guarro & stchigel Vacuiphoma oculihominis valenzuela-lopez, stchigel, guarro & cano Vacuiphoma bulgarica (aveskamp et al.) valenzuela-lopez, cano, crous, guarro & stchigel Taxonomy Similiphoma valenzuela-lopez, crous, cano, guarro & stchigel Similiphoma crystallifera (gruyter et al.) valenzuela-lopez, crous, cano, guarro & stchigel Remotididymella valenzuela-lopez, crous, cano, guarro & stchigel Remotididymella destructiva (plowr.) valenzuela-lopez, cano, crous, guarro & stchigel Remotididymella anthropophila valenzuela-lopez, cano, guarro & stchigel Pyrenochaetopsis americana valenzuela-lopez, cano, guarro & stchigel Pyrenochaetopsis Pyrenochaetopsidaceae valenzuela-lopez, crous, cano, guarro & stchigel Pyrenochaeta Py. uberiformis valenzuela-lopez, cano, guarro & stchigel Py. setosissima valenzuela-lopez, cano, crous, guarro & stchigel Py. paucisetosa valenzuela-lopez, cano, guarro & stchigel Py. globosa valenzuela-lopez, cano, guarro & stchigel Py. confluens valenzuela-lopez, cano, guarro & stchigel Py. botulispora valenzuela-lopez, cano, guarro & stchigel Pseudopyrenochaetaceae valenzuela-lopez, crous, stchigel, guarro & cano Pseudopyrenochaeta valenzuela-lopez, crous, stchigel, guarro & cano Pseudopyrenochaeta terrestris valenzuela-lopez, crous, cano, guarro & stchigel Pseudopyrenochaeta lycopersici (r.w. schneid. & gerlach) valenzuela-lopez, crous, stchigel, guarro & cano Pleosporineae Pleosporales Phoma Parapyrenochaetaceae valenzuela-lopez, crous, stchigel, guarro & cano Parapyrenochaeta valenzuela-lopez, crous, stchigel, guarro & cano Parapyrenochaeta acaciae (crous et al.) valenzuela-lopez, crous, stchigel, guarro & cano Parapy. protearum (crous) valenzuela-lopez, crous, stchigel, guarro & cano Paracucurbitaria valenzuela-lopez, stchigel, guarro & cano Paracucurbitaria italica valenzuela-lopez, crous, stchigel, guarro & cano Paracucurbitaria corni (bat. & a.f. vital) valenzuela-lopez, stchigel, guarro & cano Nothophoma variabilis valenzuela-lopez, cano, guarro & stchigel New taxa Neopyrenochaetopsis valenzuela-lopez, cano, guarro & stchigel Neopyrenochaetopsis hominis valenzuela-lopez, cano, guarro & stchigel Neopyrenochaetaceae valenzuela-lopez, crous, cano, guarro & stchigel Neopyrenochaeta valenzuela-lopez, crous, stchigel, guarro & cano Neopyrenochaeta fragariae valenzuela-lopez, crous, stchigel, guarro & cano Neopyrenochaeta acicola (moug. & lév.) valenzuela-lopez, crous, stchigel, guarro & cano Neopy. telephoni (rohit sharma et al.) valenzuela-lopez, crous, stchigel, guarro & cano Neopy. inflorescentiae (crous et al.) valenzuela-lopez, crous, stchigel, guarro & cano Neocucurbitaria cava (schulzer) valenzuela-lopez, crous, stchigel, guarro & cano Neocucurbitaria aquatica valenzuela-lopez, crous, stchigel, guarro & cano Neocu. keratinophila (verkley et al.) valenzuela-lopez, stchigel, guarro & cano Neocu. irregularis valenzuela-lopez, cano, guarro & stchigel Neocu. hakeae (crous) valenzuela-lopez, crous, stchigel, guarro & cano Neoascochyta cylindrispora valenzuela-lopez, cano, guarro & stchigel Neoa. tardicrescens valenzuela-lopez, cano, crous, guarro & stchigel Multigene phylogeny Juxtiphoma valenzuela-lopez, cano, crous, guarro & stchigel Juxtiphoma eupyrena (sacc.) valenzuela-lopez, cano, crous, guarro & stchigel Epicoccum proteae (crous) valenzuela-lopez, stchigel, crous, guarro & cano Epicoccum catenisporum valenzuela-lopez, stchigel, crous, guarro & cano Ep. pneumoniae valenzuela-lopez, stchigel, guarro & cano Ep. ovisporum valenzuela-lopez, stchigel, crous, guarro & cano Ep. keratinophilum valenzuela-lopez, cano, guarro & stchigel Ectophoma valenzuela-lopez, cano, crous, guarro & stchigel Ectophoma multirostrata (p.n. mathur et al.) valenzuela-lopez, cano, crous, guarro & stchigel Ec. pomi (horne) valenzuela-lopez, cano, crous, guarro & stchigel Didymellaceae Didymella brunneospora valenzuela-lopez, cano, crous, guarro & stchigel D. keratinophila valenzuela-lopez, cano, guarro & stchigel Cumuliphoma valenzuela-lopez, stchigel, crous, guarro & cano Cumuliphoma omnivirens (aveskamp et al.) valenzuela-lopez, stchigel, crous, guarro & cano Cumuliphoma indica valenzuela-lopez, cano, crous, guarro & stchigel Cucurbitariaceae Cu. pneumoniae valenzuela-lopez, stchigel, crous, guarro & cano Allophoma cylindrispora valenzuela-lopez, cano, guarro & stchigel Allocucurbitaria valenzuela-lopez, stchigel, guarro & cano Allocucurbitaria botulispora valenzuela-lopez, stchigel, guarro & cano
    Resumen: The taxonomy of the coelomycetes has undergone dramatic changes in recent years, but remains controversial due to the high number of taxa involved, their poor morphological differentiation, the rare occurrence of the sexual morphs, and rapid loss of fertility in vitro. In the present study, we revisited the families Cucurbitariaceae and Didymellaceae (Pleosporales, Dothideomycetes), which include numerous plant pathogens, endophytic species associated with a wide host range, and saprobes. The taxonomy of two of the most relevant genera, i.e. Phoma and Pyrenochaeta, remains ambiguous after several phylogenetic studies, and needs further revision. We have studied a total of 143 strains of coelomycetes from clinical or environmental origin, by combining the LSU, ITS, tub2 and rpb2 sequences for a multi-locus analysis and a detailed morphological comparison. The resulting phylogenetic tree revealed that some fungi previously considered as members of Cucurbitariaceae represented five different families, and four of them, Neopyrenochaetaceae, Parapyrenochaetaceae, Pseudopyrenochaetaceae and Pyrenochaetopsidaceae, are proposed here as new. Furthermore, 13 new genera, 28 new species, and 20 new combinations are proposed within the Pleosporineae. Moreover, four new typifications are introduced to stabilise the taxonomy of these fungi.
    Áreas temáticas: Plant science Mycology Interdisciplinar Ciências biológicas iii Ciências agrárias i Biotecnología Agricultural and biological sciences (miscellaneous)
    Acceso a la licencia de uso: https://creativecommons.org/licenses/by/3.0/es/
    ISSN: 01660616
    Direcció de correo del autor: albertomiguel.stchigel@urv.cat jose.cano@urv.cat
    Identificador del autor: 0000-0003-3987-7996 0000-0003-4495-4394
    Fecha de alta del registro: 2024-09-07
    Versión del articulo depositado: info:eu-repo/semantics/publishedVersion
    Enlace a la fuente original: https://www.ingentaconnect.com/content/wfbi/sim/2018/00000090/00000001/art00002#
    URL Documento de licencia: https://repositori.urv.cat/ca/proteccio-de-dades/
    Referencia al articulo segun fuente origial: Studies In Mycology. 90 (90): 1-69
    Referencia de l'ítem segons les normes APA: Valenzuela-Lopez N, Cano-Lira JF, Guarro J, Sutton DA, Wiederhold N, Crous PW, Stchigel AM (2018). Coelomycetous Dothideomycetes with emphasis on the families Cucurbitariaceae and Didymellaceae. Studies In Mycology, 90(90), 1-69. DOI: 10.1016/j.simyco.2017.11.003
    DOI del artículo: 10.1016/j.simyco.2017.11.003
    Entidad: Universitat Rovira i Virgili
    Año de publicación de la revista: 2018
    Tipo de publicación: Journal Publications
  • Palabras clave:

    Agricultural and Biological Sciences (Miscellaneous),Mycology,Plant Science
    Xenopyrenochaetopsis valenzuela-lopez, crous, stchigel, guarro & cano
    Xenopyrenochaetopsis pratorum (p.r. johnst. & boerema) valenzuela-lopez, crous, stchigel, guarro & cano
    Xenodidymella saxea (aveskamp et al.) valenzuela-lopez, crous, cano, guarro & stchigel
    Vacuiphoma valenzuela-lopez, cano, crous, guarro & stchigel
    Vacuiphoma oculihominis valenzuela-lopez, stchigel, guarro & cano
    Vacuiphoma bulgarica (aveskamp et al.) valenzuela-lopez, cano, crous, guarro & stchigel
    Taxonomy
    Similiphoma valenzuela-lopez, crous, cano, guarro & stchigel
    Similiphoma crystallifera (gruyter et al.) valenzuela-lopez, crous, cano, guarro & stchigel
    Remotididymella valenzuela-lopez, crous, cano, guarro & stchigel
    Remotididymella destructiva (plowr.) valenzuela-lopez, cano, crous, guarro & stchigel
    Remotididymella anthropophila valenzuela-lopez, cano, guarro & stchigel
    Pyrenochaetopsis americana valenzuela-lopez, cano, guarro & stchigel
    Pyrenochaetopsis
    Pyrenochaetopsidaceae valenzuela-lopez, crous, cano, guarro & stchigel
    Pyrenochaeta
    Py. uberiformis valenzuela-lopez, cano, guarro & stchigel
    Py. setosissima valenzuela-lopez, cano, crous, guarro & stchigel
    Py. paucisetosa valenzuela-lopez, cano, guarro & stchigel
    Py. globosa valenzuela-lopez, cano, guarro & stchigel
    Py. confluens valenzuela-lopez, cano, guarro & stchigel
    Py. botulispora valenzuela-lopez, cano, guarro & stchigel
    Pseudopyrenochaetaceae valenzuela-lopez, crous, stchigel, guarro & cano
    Pseudopyrenochaeta valenzuela-lopez, crous, stchigel, guarro & cano
    Pseudopyrenochaeta terrestris valenzuela-lopez, crous, cano, guarro & stchigel
    Pseudopyrenochaeta lycopersici (r.w. schneid. & gerlach) valenzuela-lopez, crous, stchigel, guarro & cano
    Pleosporineae
    Pleosp
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